call loadScript ..\jsmol\core\package.js
call loadScript ..\jsmol\core\core.z.js -- required by ClazzNode
Jmol JavaScript applet jmolApplet0_object__314922392839171__ initializing
getValue debug = null
getValue logLevel = null
getValue allowjavascript = null
AppletRegistry.checkIn(jmolApplet0_object__314922392839171__)
viewerOptions:
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(C) 2012 Jmol Development
Jmol Version: 13.1.17_dev_2013.06.20 $Date: 2013-06-20 09:58:27 -0500 (Thu, 20 Jun 2013) $
java.vendor: j2s
java.version: 0.0
os.name: j2s
Access: ALL
memory: 0.0/0.0
processors available: 1
useCommandThread: false
appletId:jmolApplet0_object (signed)
starting HoverWatcher_1
getValue emulate = null
defaults = "Jmol"
getValue boxbgcolor = null
getValue bgcolor = #FFFFFF
backgroundColor = "#FFFFFF"
getValue ANIMFRAMECallback = null
getValue APPLETREADYCallback = Jmol._readyCallback
APPLETREADYCallback = "Jmol._readyCallback"
getValue ATOMMOVEDCallback = null
getValue CLICKCallback = null
getValue ECHOCallback = null
getValue ERRORCallback = null
getValue EVALCallback = null
getValue HOVERCallback = null
getValue LOADSTRUCTCallback = null
getValue MEASURECallback = null
getValue MESSAGECallback = null
getValue MINIMIZATIONCallback = null
getValue PICKCallback = null
getValue RESIZECallback = null
getValue SCRIPTCallback = null
getValue SYNCCallback = null
getValue doTranslate = null
language=en_US
getValue popupMenu = null
getValue script = null
Jmol applet jmolApplet0_object__314922392839171__ ready
call loadScript ..\jsmol\core\corescript.z.js
starting QueueThread0_2
script 1 started
call loadScript ..\jsmol\core\corestate.z.js
FileManager.getAtomSetCollectionFromFile(amylase_acarbose.ent)
starting HoverWatcher_3
FileManager opening https://chemapps.colostate.edu/chem103/molecules/bio/amylase_acarbose.ent
The Resolver thinks Pdb
call loadScript ..\jsmol\core\corebio.z.js
HYDROLASE 07-JUN-99 1CPU
SUBSITE MAPPING OF THE ACTIVE SITE OF HUMAN PANCREATIC
ALPHA-AMYLASE USING SUBSTRATES, THE PHARMACOLOGICAL
INHIBITOR ACARBOSE, AND AN ACTIVE SITE VARIANT
call loadScript ..\jsmol\core\coresym.z.js
call loadScript ..\jsmol\J\symmetry\HallRotationTerm.js
biomolecule 1: number of transforms: 1
Setting space group name to P 21 21 21
Time for openFile(amylase_acarbose.ent): 1165 ms
reading 4277 atoms
ModelSet: haveSymmetry:false haveUnitcells:true haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Jmol
4277 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
HYDROLASE 07-JUN-99 1CPU
SUBSITE MAPPING OF THE ACTIVE SITE OF HUMAN PANCREATIC
ALPHA-AMYLASE USING SUBSTRATES, THE PHARMACOLOGICAL
INHIBITOR ACARBOSE, AND AN ACTIVE SITE VARIANT
4000 atoms selected
261 atoms deleted
4000 atoms selected
16 atoms selected
